Stanford HGDP SNP Genotyping Data
The genotypes were generated on Illumina 650Y arrays, with a GenCall Score cutoff of 0.25. Samples with an overall call rate < 98.5% were removed. No filtering of SNPs was done, so be aware that low quality SNPs are included in these files.
Tab-delimited (matrix format) genotypes for 1043 samples (columns) and 660918 markers (rows). The forward strand is given, with no-calls designated "--".
Tab-delimited list of 660918 markers, including chromosome and Build 36.1 coordinates.
List of samples included.